File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/21cc0100510dbece12f9f9cce9898d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jrnew87m because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:49,776 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:50,643 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:50,814 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:51,831 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:51,980 - cnv_pipe.batch.run_model - INFO - Processing cluster 1179 with 183 probes
2026-06-08 22:22:52,356 - cnv_pipe.batch.run_model.cluster1179 - INFO - Child process started for cluster 1179 with 183 probes
2026-06-08 22:23:48,352 - cnv_pipe.batch.run_model.cluster1179 - INFO - Child process finished cluster 1179. Wrote cluster_1179_samples.csv and cluster_1179_params.csv
2026-06-08 22:23:48,353 - cnv_pipe.batch.run_model - INFO - Cluster 1179 finished in 56.37 seconds. Status: SUCCESS