File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/31/ae1416c06b044b8e7858461430e32e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-iho2md7b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:21:12,621 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:21:13,459 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:21:13,631 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:21:14,671 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:21:14,755 - cnv_pipe.batch.run_model - INFO - Processing cluster 189 with 171 probes
2026-06-08 22:21:15,256 - cnv_pipe.batch.run_model.cluster189 - INFO - Child process started for cluster 189 with 171 probes
2026-06-08 22:22:07,703 - cnv_pipe.batch.run_model.cluster189 - INFO - Child process finished cluster 189. Wrote cluster_189_samples.csv and cluster_189_params.csv
2026-06-08 22:22:07,704 - cnv_pipe.batch.run_model - INFO - Cluster 189 finished in 52.95 seconds. Status: SUCCESS