File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/ef823722485ec760d22085e440f7e5/.command.log
Size
1.6 KB
Task
DAQ:SAMTOOLS_MERGE (Sig_18_Blood)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/29d8a99e90d66f250a7d85cbbc927d/Sig_18_Blood.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/65/b64bde2ccf9face25cd3c68a0c87f6/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/ef823722485ec760d22085e440f7e5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f5/075b92e382bd77450f9d9bdcdd2389/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/ea565165f69e7e8f88d7e7eeef2e48/Sig_18_Blood.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/5cac93f1ed86c52b4d070c66ac23de/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/f2d840a9839cc8727d112594229eb1/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2d/8db8ada21169d7f45688eeac68c97e/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/ef823722485ec760d22085e440f7e5/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ad/9ea75918c79b7a0bf61749e7459cd8/Sig_18_Blood.bam
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory