cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:160000001, elapsed 0.0s, est remaining 0.6s, peak mem 111MB, user 0.1s, sys 0.6s, output queue size 1
progress 10% @chr2:60000001, elapsed 0.1s, est remaining 0.5s, peak mem 111MB, user 0.1s, sys 1.4s, output queue size 13
progress 15% @chr2:220000001, elapsed 0.1s, est remaining 0.5s, peak mem 111MB, user 0.2s, sys 2.2s, output queue size 15
progress 20% @chr3:123000001, elapsed 0.1s, est remaining 0.5s, peak mem 111MB, user 0.2s, sys 2.9s, output queue size 31
progress 25% @chr4:116000001, elapsed 0.1s, est remaining 0.4s, peak mem 111MB, user 0.2s, sys 3.8s, output queue size 6
progress 30% @chr5:86000001, elapsed 0.2s, est remaining 0.4s, peak mem 111MB, user 0.3s, sys 4.6s, output queue size 13
progress 35% @chr6:55000001, elapsed 0.2s, est remaining 0.4s, peak mem 111MB, user 0.3s, sys 5.3s, output queue size 25
progress 40% @chr7:50000001, elapsed 0.2s, est remaining 0.3s, peak mem 111MB, user 0.4s, sys 6.1s, output queue size 5
progress 45% @chr8:55000001, elapsed 0.3s, est remaining 0.3s, peak mem 111MB, user 0.4s, sys 6.9s, output queue size 14
progress 50% @chr9:70000001, elapsed 0.3s, est remaining 0.3s, peak mem 111MB, user 0.6s, sys 8.2s, output queue size 10
progress 55% @chr10:83000001, elapsed 0.3s, est remaining 0.3s, peak mem 111MB, user 0.6s, sys 9.5s, output queue size 12
progress 60% @chr11:117000001, elapsed 0.4s, est remaining 0.3s, peak mem 111MB, user 0.7s, sys 10.7s, output queue size 15
progress 65% @chr13:15000001, elapsed 0.4s, est remaining 0.2s, peak mem 111MB, user 0.9s, sys 11.9s, output queue size 12
progress 70% @chr14:56000001, elapsed 0.5s, est remaining 0.2s, peak mem 111MB, user 0.9s, sys 13.1s, output queue size 19
progress 75% @chr16:9000001, elapsed 0.5s, est remaining 0.2s, peak mem 111MB, user 1.0s, sys 14.3s, output queue size 15
progress 80% @chr17:77000001, elapsed 0.6s, est remaining 0.1s, peak mem 111MB, user 1.1s, sys 15.5s, output queue size 7
progress 85% @chr20:19000001, elapsed 0.6s, est remaining 0.1s, peak mem 111MB, user 1.1s, sys 16.8s, output queue size 12
progress 90% @chrX:35000001, elapsed 0.7s, est remaining 0.1s, peak mem 129MB, user 1.6s, sys 17.6s, output queue size 114
progress 95% @chr21:36000001, elapsed 0.7s, est remaining 0.0s, peak mem 141MB, user 2.2s, sys 18.6s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.3s, est remaining 0.0s, peak mem 165MB, user 3.7s, sys 20.3s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395348
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.172 user 10.347 sys 11.893 real
done: 1 calls 0.000 user 0.008 sys 0.011 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.004 user 0.002 sys 1.277 real
idle: 74 calls 0.007 user 0.024 sys 45.465 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 173170688 mem 4.084 user 21.061 sys 2.760 real