File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/1b5c95f08308a2534119b0a23cca2d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bfwb4vms because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:51,925 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:52,738 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:52,913 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:53,847 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:54,031 - cnv_pipe.batch.run_model - INFO - Processing cluster 913 with 200 probes
2026-06-08 22:22:54,417 - cnv_pipe.batch.run_model.cluster913 - INFO - Child process started for cluster 913 with 200 probes
2026-06-08 22:23:55,744 - cnv_pipe.batch.run_model.cluster913 - INFO - Child process finished cluster 913. Wrote cluster_913_samples.csv and cluster_913_params.csv
2026-06-08 22:23:55,746 - cnv_pipe.batch.run_model - INFO - Cluster 913 finished in 61.72 seconds. Status: SUCCESS