cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:157000001, elapsed 0.0s, est remaining 0.9s, peak mem 99MB, user 0.1s, sys 0.9s, output queue size 7
progress 10% @chr2:67000001, elapsed 0.1s, est remaining 0.8s, peak mem 99MB, user 0.2s, sys 2.0s, output queue size 24
progress 15% @chr2:230000001, elapsed 0.1s, est remaining 0.7s, peak mem 99MB, user 0.3s, sys 3.1s, output queue size 8
progress 20% @chr3:148000001, elapsed 0.2s, est remaining 0.6s, peak mem 99MB, user 0.5s, sys 4.1s, output queue size 27
progress 25% @chr4:135000001, elapsed 0.2s, est remaining 0.6s, peak mem 99MB, user 0.5s, sys 5.3s, output queue size 14
progress 30% @chr5:50000001, elapsed 0.2s, est remaining 0.6s, peak mem 99MB, user 0.6s, sys 6.4s, output queue size 36
progress 35% @chr6:63000001, elapsed 0.3s, est remaining 0.5s, peak mem 99MB, user 0.8s, sys 7.6s, output queue size 17
progress 40% @chr7:55000001, elapsed 0.3s, est remaining 0.5s, peak mem 99MB, user 0.9s, sys 8.8s, output queue size 10
progress 45% @chr8:54000001, elapsed 0.4s, est remaining 0.5s, peak mem 99MB, user 1.1s, sys 9.9s, output queue size 25
progress 50% @chr9:65000001, elapsed 0.4s, est remaining 0.4s, peak mem 99MB, user 1.3s, sys 11.0s, output queue size 8
progress 55% @chr10:89000001, elapsed 0.5s, est remaining 0.4s, peak mem 99MB, user 1.4s, sys 12.2s, output queue size 26
progress 60% @chr11:118000001, elapsed 0.5s, est remaining 0.3s, peak mem 99MB, user 1.4s, sys 13.4s, output queue size 20
progress 65% @chr13:12000001, elapsed 0.5s, est remaining 0.3s, peak mem 99MB, user 1.5s, sys 14.5s, output queue size 3
progress 70% @chr14:52000001, elapsed 0.6s, est remaining 0.2s, peak mem 99MB, user 1.6s, sys 15.8s, output queue size 9
progress 75% @chr16:36000001, elapsed 0.6s, est remaining 0.2s, peak mem 99MB, user 1.6s, sys 16.9s, output queue size 29
progress 80% @chr17:79000001, elapsed 0.7s, est remaining 0.2s, peak mem 99MB, user 1.7s, sys 18.1s, output queue size 13
progress 85% @chr20:16000001, elapsed 0.7s, est remaining 0.1s, peak mem 99MB, user 1.8s, sys 19.3s, output queue size 6
progress 90% @chrX:47000001, elapsed 0.8s, est remaining 0.1s, peak mem 108MB, user 2.3s, sys 20.1s, output queue size 114
progress 95% @chrY:31000001, elapsed 0.8s, est remaining 0.0s, peak mem 123MB, user 2.7s, sys 21.4s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.3s, est remaining 0.0s, peak mem 150MB, user 3.9s, sys 23.0s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395348
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.282 user 12.114 sys 13.269 real
done: 1 calls 0.000 user 0.000 sys 0.003 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.003 user 0.002 sys 1.311 real
idle: 81 calls 0.005 user 0.018 sys 43.372 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 157442048 mem 4.115 user 23.587 sys 2.475 real