File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/bf/2d9f99d42ec6b7275b8a810cfae654/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-y24aszsp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:09,644 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:10,504 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:10,682 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:11,842 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:11,927 - cnv_pipe.batch.run_model - INFO - Processing cluster 836 with 193 probes
2026-06-08 22:22:12,455 - cnv_pipe.batch.run_model.cluster836 - INFO - Child process started for cluster 836 with 193 probes
2026-06-08 22:23:12,462 - cnv_pipe.batch.run_model.cluster836 - INFO - Child process finished cluster 836. Wrote cluster_836_samples.csv and cluster_836_params.csv
2026-06-08 22:23:12,464 - cnv_pipe.batch.run_model - INFO - Cluster 836 finished in 60.54 seconds. Status: SUCCESS