File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/27/c5c7d921aca5be8c38f04ba3725edd/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xf4jpagm because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:45,183 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:46,068 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:46,245 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:47,268 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:47,443 - cnv_pipe.batch.run_model - INFO - Processing cluster 1119 with 194 probes
2026-06-08 22:22:47,829 - cnv_pipe.batch.run_model.cluster1119 - INFO - Child process started for cluster 1119 with 194 probes
2026-06-08 22:23:46,774 - cnv_pipe.batch.run_model.cluster1119 - INFO - Child process finished cluster 1119. Wrote cluster_1119_samples.csv and cluster_1119_params.csv
2026-06-08 22:23:46,775 - cnv_pipe.batch.run_model - INFO - Cluster 1119 finished in 59.33 seconds. Status: SUCCESS