File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/14/7f7b2038aec19e3be6d395a6ae3c90/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yyr4o0mh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:37,015 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:38,025 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:38,232 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:39,407 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:39,573 - cnv_pipe.batch.run_model - INFO - Processing cluster 1603 with 186 probes
2026-06-08 22:23:40,029 - cnv_pipe.batch.run_model.cluster1603 - INFO - Child process started for cluster 1603 with 186 probes
2026-06-08 22:24:45,037 - cnv_pipe.batch.run_model.cluster1603 - INFO - Child process finished cluster 1603. Wrote cluster_1603_samples.csv and cluster_1603_params.csv
2026-06-08 22:24:45,039 - cnv_pipe.batch.run_model - INFO - Cluster 1603 finished in 65.47 seconds. Status: SUCCESS