File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/12/1162f7764a72ce70ec522cd6dfc98e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6l_uscl8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:29,623 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:30,479 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:30,645 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:31,540 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:31,621 - cnv_pipe.batch.run_model - INFO - Processing cluster 1571 with 195 probes
2026-06-08 22:23:32,094 - cnv_pipe.batch.run_model.cluster1571 - INFO - Child process started for cluster 1571 with 195 probes
2026-06-08 22:24:31,077 - cnv_pipe.batch.run_model.cluster1571 - INFO - Child process finished cluster 1571. Wrote cluster_1571_samples.csv and cluster_1571_params.csv
2026-06-08 22:24:31,079 - cnv_pipe.batch.run_model - INFO - Cluster 1571 finished in 59.46 seconds. Status: SUCCESS