File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/33c6db2f37d50d4cbba12ceae019e1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-f50rrfj0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:20:57,961 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:20:58,983 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:20:59,175 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:21:00,225 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:21:00,384 - cnv_pipe.batch.run_model - INFO - Processing cluster 655 with 177 probes
2026-06-08 22:21:00,831 - cnv_pipe.batch.run_model.cluster655 - INFO - Child process started for cluster 655 with 177 probes
2026-06-08 22:22:03,134 - cnv_pipe.batch.run_model.cluster655 - INFO - Child process finished cluster 655. Wrote cluster_655_samples.csv and cluster_655_params.csv
2026-06-08 22:22:03,135 - cnv_pipe.batch.run_model - INFO - Cluster 655 finished in 62.75 seconds. Status: SUCCESS