File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/7ffcf0c513b1ae1eae5d60221849e2/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-v4e1q0jy because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:28,070 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:28,903 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:29,072 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:30,123 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:30,192 - cnv_pipe.batch.run_model - INFO - Processing cluster 1913 with 193 probes
2026-06-08 22:24:30,565 - cnv_pipe.batch.run_model.cluster1913 - INFO - Child process started for cluster 1913 with 193 probes
2026-06-08 22:25:28,296 - cnv_pipe.batch.run_model.cluster1913 - INFO - Child process finished cluster 1913. Wrote cluster_1913_samples.csv and cluster_1913_params.csv
2026-06-08 22:25:28,298 - cnv_pipe.batch.run_model - INFO - Cluster 1913 finished in 58.11 seconds. Status: SUCCESS