cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_tissue.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed Sig_18_tissue_xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:160000001, elapsed 0.0s, est remaining 0.4s, peak mem 114MB, user 0.1s, sys 0.2s, output queue size 1
progress 10% @chr2:72000001, elapsed 0.0s, est remaining 0.3s, peak mem 114MB, user 0.2s, sys 0.7s, output queue size 1
progress 15% @chr2:233000001, elapsed 0.1s, est remaining 0.3s, peak mem 114MB, user 0.2s, sys 1.3s, output queue size 2
progress 20% @chr3:153000001, elapsed 0.1s, est remaining 0.3s, peak mem 114MB, user 0.3s, sys 1.7s, output queue size 2
progress 25% @chr4:115000001, elapsed 0.1s, est remaining 0.3s, peak mem 114MB, user 0.3s, sys 2.1s, output queue size 4
progress 30% @chr5:87000001, elapsed 0.1s, est remaining 0.3s, peak mem 114MB, user 0.4s, sys 2.6s, output queue size 12
progress 35% @chr6:65000001, elapsed 0.1s, est remaining 0.2s, peak mem 114MB, user 0.5s, sys 3.1s, output queue size 11
progress 40% @chr7:56000001, elapsed 0.1s, est remaining 0.2s, peak mem 114MB, user 0.6s, sys 3.6s, output queue size 19
progress 45% @chr8:32000001, elapsed 0.2s, est remaining 0.2s, peak mem 114MB, user 0.6s, sys 4.1s, output queue size 25
progress 50% @chr9:72000001, elapsed 0.2s, est remaining 0.2s, peak mem 114MB, user 0.7s, sys 4.4s, output queue size 1
progress 55% @chr10:85000001, elapsed 0.2s, est remaining 0.2s, peak mem 114MB, user 0.8s, sys 5.0s, output queue size 10
progress 60% @chr11:121000001, elapsed 0.2s, est remaining 0.1s, peak mem 114MB, user 0.8s, sys 5.5s, output queue size 2
progress 65% @chr13:13000001, elapsed 0.2s, est remaining 0.1s, peak mem 114MB, user 0.9s, sys 6.0s, output queue size 2
progress 70% @chr14:61000001, elapsed 0.3s, est remaining 0.1s, peak mem 114MB, user 1.0s, sys 6.5s, output queue size 15
progress 75% @chr16:13000001, elapsed 0.3s, est remaining 0.1s, peak mem 114MB, user 1.0s, sys 6.9s, output queue size 4
progress 80% @chr18:1, elapsed 0.3s, est remaining 0.1s, peak mem 114MB, user 1.1s, sys 7.4s, output queue size 2
progress 85% @chr20:21000001, elapsed 0.3s, est remaining 0.1s, peak mem 114MB, user 1.2s, sys 7.9s, output queue size 1
progress 90% @chrX:41000001, elapsed 0.4s, est remaining 0.0s, peak mem 144MB, user 1.5s, sys 8.2s, output queue size 114
progress 95% @chrY:40000001, elapsed 0.4s, est remaining 0.0s, peak mem 163MB, user 1.8s, sys 8.5s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.8s, est remaining 0.0s, peak mem 174MB, user 3.7s, sys 8.7s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: 1f8bfbff fffab20b
  extended: f1bf07ab 1a407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) Platinum 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50047057
reads: 1001838
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.294 user 4.442 sys 5.929 real
done: 1 calls 0.006 user 0.000 sys 0.008 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.005 user 0.003 sys 0.758 real
idle: 73 calls 0.021 user 0.038 sys 41.231 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 182751232 mem 4.230 user 9.366 sys 2.325 real