File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/7fc753c5e9d49714ba83b0b5542f32/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-by7800h0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:54,914 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:55,741 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:55,920 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:56,868 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:56,943 - cnv_pipe.batch.run_model - INFO - Processing cluster 1711 with 155 probes
2026-06-08 22:23:57,415 - cnv_pipe.batch.run_model.cluster1711 - INFO - Child process started for cluster 1711 with 155 probes
2026-06-08 22:24:44,672 - cnv_pipe.batch.run_model.cluster1711 - INFO - Child process finished cluster 1711. Wrote cluster_1711_samples.csv and cluster_1711_params.csv
2026-06-08 22:24:44,673 - cnv_pipe.batch.run_model - INFO - Cluster 1711 finished in 47.73 seconds. Status: SUCCESS