Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f4/a08b7f35625c8d38e05a9d83efab86/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ad/ded0dc28f0bedef0afd0b3c848896c/HCC1395_BL.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ad/ded0dc28f0bedef0afd0b3c848896c/HCC1395_BL.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f4/a08b7f35625c8d38e05a9d83efab86/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz.tbi
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-08T22:17:17.398392Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T22:17:17.402436Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T22:17:17.402459Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T22:17:17.402465Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T22:17:17.402469Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXlWIoxJ'
[2026-06-08T22:17:17.402472Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T22:17:17.402477Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T22:17:17.402480Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T22:17:17.402484Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] [RunParameters] memMb: 3096076
[2026-06-08T22:17:17.402487Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T22:17:17.402491Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T22:17:17.402494Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T22:17:17.402498Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T22:17:17.402501Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T22:17:17.403307Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T22:17:17.403420Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T22:17:17.408998Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T22:17:17.409782Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T22:17:17.410120Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T22:17:17.410292Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T22:17:17.410774Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.411543Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.411834Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.411984Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.412330Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.412540Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.412686Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.412903Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.415337Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.415666Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T22:17:17.416040Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.416193Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.416346Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.416481Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.417058Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.417173Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.417307Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.417378Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.417500Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.417562Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.417734Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.418021Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.418273Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.418342Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.418454Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.418516Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.418635Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.418699Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.418809Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.418874Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.419014Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.419127Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.419252Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.419437Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.419775Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.419843Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.419952Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.420014Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.420121Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.420187Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.420294Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.420353Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.420462Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.420527Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.420631Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.420695Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.420874Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.421250Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.421411Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.421483Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.421586Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.421648Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.421757Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.421819Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.421926Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.421987Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.422095Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.422159Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.422271Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.422393Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.422687Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.423116Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.423635Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.423705Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.423812Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.423880Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.423988Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.424050Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.424157Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.424224Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.424327Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.424393Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.424536Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.424610Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.425927Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.426514Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.426640Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.426715Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.426827Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.426892Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.427043Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.427105Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.427222Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.427282Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.427391Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.427485Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.427827Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.428355Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.428463Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.428527Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.428639Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.428702Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.428813Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.428876Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.428988Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.429049Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.429160Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.429223Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.443665Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.444541Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.444685Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.445542Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.445734Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.445820Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.445973Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.446233Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.446306Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.446437Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.446619Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:17:17.446707Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T22:17:17.447634Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.449922Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-08T22:17:17.450104Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.450885Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.451546Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.452542Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.454659Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.456068Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-08T22:17:17.456749Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.461684Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-08T22:17:17.466545Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-08T22:17:17.471384Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-08T22:17:17.471620Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-08T22:17:17.474941Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-08T22:17:17.477266Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-08T22:17:17.540265Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.541230Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.549207Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-08T22:17:17.608093Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.608180Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.608212Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.609164Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.609524Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.610155Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.615283Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-08T22:17:17.618142Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-08T22:17:17.618968Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-08T22:17:17.675324Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.676653Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.679634Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-08T22:17:17.692621Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.694117Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:17.698135Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-08T22:17:18.912109Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:18.913259Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:18.916699Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-08T22:17:18.978061Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:18.979513Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:18.980797Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:18.983518Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:18.984307Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-08T22:17:18.986434Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-08T22:17:19.015673Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.016738Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.020137Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-08T22:17:19.032975Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.034039Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.036927Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-08T22:17:19.050246Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.051265Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.054874Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-08T22:17:19.059262Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.060247Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.063334Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-08T22:17:19.124652Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.124755Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.125765Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.126387Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.129769Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-08T22:17:19.492696Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.492803Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.493911Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.494660Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.498962Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-08T22:17:19.500108Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-08T22:17:19.561286Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.561408Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.562405Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.563265Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.567380Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-08T22:17:19.568488Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-08T22:17:19.628221Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.629300Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.633389Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-08T22:17:19.694441Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.695538Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.699108Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-08T22:17:19.910648Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.911701Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.915113Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-08T22:17:19.977547Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.978597Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:19.982497Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-08T22:17:20.043274Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.044339Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.047975Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-08T22:17:20.108963Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.110000Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.113936Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-08T22:17:20.174638Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.175655Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.178995Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-08T22:17:20.239825Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.240722Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.244201Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-08T22:17:20.305196Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.306176Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.310199Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-08T22:17:20.370914Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.371917Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.375829Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-08T22:17:20.825981Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-08T22:17:20.837880Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.837980Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.838843Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.839209Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.842229Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-08T22:17:20.843837Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-08T22:17:20.903532Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.903618Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.904427Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.905035Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.908735Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-08T22:17:20.964938Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-08T22:17:20.970191Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.971153Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.974075Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-08T22:17:20.987207Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.988082Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:20.990949Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-08T22:17:21.052944Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.053058Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.053998Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.054912Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.058631Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-08T22:17:21.059768Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-08T22:17:21.089748Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.090643Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.093866Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-08T22:17:21.205299Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.206282Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.209736Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-08T22:17:21.371112Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.372213Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.375494Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-08T22:17:21.436748Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.437693Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.441222Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-08T22:17:21.503666Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.504541Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.507731Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-08T22:17:21.520793Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.521561Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.524515Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-08T22:17:21.553788Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.554595Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.557281Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-08T22:17:21.558327Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.559106Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.562328Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-08T22:17:21.591295Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.591401Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.592167Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.592585Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.595745Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-08T22:17:21.596343Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.596953Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-08T22:17:21.597607Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.600550Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-08T22:17:21.629747Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.629839Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.630555Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.631255Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.634179Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-08T22:17:21.635213Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-08T22:17:21.664288Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.665071Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.668296Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-08T22:17:21.669064Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.669742Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.672667Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-08T22:17:21.734091Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.734188Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.734937Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.735598Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.738954Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-08T22:17:21.740102Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-08T22:17:21.768459Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.769252Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.772399Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-08T22:17:21.773254Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.773887Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.777367Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-08T22:17:21.790950Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.791715Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.795182Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-08T22:17:21.795677Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.796388Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.800293Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-08T22:17:21.828969Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.829895Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.830188Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.831471Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.834103Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.834339Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-08T22:17:21.836390Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.837147Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-08T22:17:21.840680Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-08T22:17:21.901774Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.901869Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.902554Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.902894Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.907722Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-08T22:17:21.909093Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-08T22:17:21.968587Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.968686Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.969401Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.970153Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:21.974737Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-08T22:17:21.976631Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-08T22:17:22.035687Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.036469Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.039867Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-08T22:17:22.101146Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.101913Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.105630Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-08T22:17:22.118426Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.119124Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.124038Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-08T22:17:22.636154Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.636869Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.640103Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-08T22:17:22.701205Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.701905Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.705756Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-08T22:17:22.766973Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.767712Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.771000Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T22:17:22.832422Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.833110Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.835917Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T22:17:22.897175Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.897885Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.900924Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T22:17:22.962324Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.963025Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:22.966147Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-08T22:17:23.028506Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.029179Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.032569Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-08T22:17:23.193962Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.194572Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.197536Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-08T22:17:23.260110Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.260745Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.264142Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-08T22:17:23.325130Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.325759Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.328969Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-08T22:17:23.390157Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.390780Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.394022Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-08T22:17:23.455113Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.455760Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.459581Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-08T22:17:23.520962Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.521620Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.524800Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-08T22:17:23.586015Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.586597Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.589333Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-08T22:17:23.651001Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.815762Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.816343Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.819472Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-08T22:17:23.848551Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.012882Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.013470Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.016593Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-08T22:17:24.021218Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.021723Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.024562Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-08T22:17:24.085966Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.086058Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.089726Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.090181Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.092997Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-08T22:17:24.154648Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.268854Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.269336Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.272748Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-08T22:17:24.333950Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.748745Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.749256Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.752572Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-08T22:17:24.781891Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.782354Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.785171Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-08T22:17:24.785997Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.817945Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.818205Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.818342Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.819022Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.819637Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.823398Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T22:17:24.825119Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T22:17:24.826114Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T22:17:24.853965Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.854057Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.854420Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.855142Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.856940Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.858590Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T22:17:24.859536Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T22:17:24.890480Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.890551Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.890725Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.893771Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T22:17:24.922941Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.043756Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T22:17:36.291001Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T22:17:36.291001Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] 
[2026-06-08T22:17:36.291001Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T22:17:36.291066Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] 
[2026-06-08T22:17:36.291073Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T22:17:36.291080Z] [nf-f4a08b7f35625c8d38e05a9d83efab86-3d0f4-69w76] [615_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec