File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/d3b8168f9701b9136c623f7b6528e8/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-tv3y32nv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:22,394 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:23,211 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:23,378 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:24,313 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:24,498 - cnv_pipe.batch.run_model - INFO - Processing cluster 1865 with 184 probes
2026-06-08 22:24:24,883 - cnv_pipe.batch.run_model.cluster1865 - INFO - Child process started for cluster 1865 with 184 probes
2026-06-08 22:25:19,021 - cnv_pipe.batch.run_model.cluster1865 - INFO - Child process finished cluster 1865. Wrote cluster_1865_samples.csv and cluster_1865_params.csv
2026-06-08 22:25:19,022 - cnv_pipe.batch.run_model - INFO - Cluster 1865 finished in 54.52 seconds. Status: SUCCESS