File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/c943db4474553baaf09e3119987e23/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ajwf6nkw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:25,365 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:26,168 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:26,339 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:27,260 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:27,419 - cnv_pipe.batch.run_model - INFO - Processing cluster 1884 with 182 probes
2026-06-08 22:24:27,787 - cnv_pipe.batch.run_model.cluster1884 - INFO - Child process started for cluster 1884 with 182 probes
2026-06-08 22:25:21,590 - cnv_pipe.batch.run_model.cluster1884 - INFO - Child process finished cluster 1884. Wrote cluster_1884_samples.csv and cluster_1884_params.csv
2026-06-08 22:25:21,591 - cnv_pipe.batch.run_model - INFO - Cluster 1884 finished in 54.17 seconds. Status: SUCCESS