File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d5/b86393f796c98ac5f0b6cc2b08fd5c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4zq9scsi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:21:38,623 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:21:39,459 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:21:39,639 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:21:40,826 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:21:40,900 - cnv_pipe.batch.run_model - INFO - Processing cluster 849 with 186 probes
2026-06-08 22:21:41,294 - cnv_pipe.batch.run_model.cluster849 - INFO - Child process started for cluster 849 with 186 probes
2026-06-08 22:22:39,105 - cnv_pipe.batch.run_model.cluster849 - INFO - Child process finished cluster 849. Wrote cluster_849_samples.csv and cluster_849_params.csv
2026-06-08 22:22:39,106 - cnv_pipe.batch.run_model - INFO - Cluster 849 finished in 58.21 seconds. Status: SUCCESS