File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cd/30d68373d196d04e00258801da5e98/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mocurk6s because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:55,481 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:56,358 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:56,531 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:57,562 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:57,634 - cnv_pipe.batch.run_model - INFO - Processing cluster 1333 with 44 probes
2026-06-08 22:23:58,005 - cnv_pipe.batch.run_model.cluster1333 - INFO - Child process started for cluster 1333 with 44 probes
2026-06-08 22:24:16,515 - cnv_pipe.batch.run_model.cluster1333 - INFO - Child process finished cluster 1333. Wrote cluster_1333_samples.csv and cluster_1333_params.csv
2026-06-08 22:24:16,515 - cnv_pipe.batch.run_model - INFO - Cluster 1333 finished in 18.88 seconds. Status: SUCCESS