File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/46/deec33938d6f3ddd5330d93b73ec4c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-z89fs9ad because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:21:12,579 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:21:13,453 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:21:13,631 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:21:14,793 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:21:15,014 - cnv_pipe.batch.run_model - INFO - Processing cluster 608 with 182 probes
2026-06-08 22:21:15,407 - cnv_pipe.batch.run_model.cluster608 - INFO - Child process started for cluster 608 with 182 probes
2026-06-08 22:22:12,676 - cnv_pipe.batch.run_model.cluster608 - INFO - Child process finished cluster 608. Wrote cluster_608_samples.csv and cluster_608_params.csv
2026-06-08 22:22:12,678 - cnv_pipe.batch.run_model - INFO - Cluster 608 finished in 57.66 seconds. Status: SUCCESS