File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/10/5e233761eced00aba85f748fe197d3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-t5_q_2tp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:12,064 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:12,910 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:13,082 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:14,143 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:14,215 - cnv_pipe.batch.run_model - INFO - Processing cluster 1463 with 141 probes
2026-06-08 22:23:14,592 - cnv_pipe.batch.run_model.cluster1463 - INFO - Child process started for cluster 1463 with 141 probes
2026-06-08 22:23:58,446 - cnv_pipe.batch.run_model.cluster1463 - INFO - Child process finished cluster 1463. Wrote cluster_1463_samples.csv and cluster_1463_params.csv
2026-06-08 22:23:58,447 - cnv_pipe.batch.run_model - INFO - Cluster 1463 finished in 44.23 seconds. Status: SUCCESS