File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/466383385c2fd1b1052174ab67b7d5/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4phg1dp3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:45,321 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:46,128 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:46,297 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:47,291 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:47,361 - cnv_pipe.batch.run_model - INFO - Processing cluster 1459 with 120 probes
2026-06-08 22:23:47,745 - cnv_pipe.batch.run_model.cluster1459 - INFO - Child process started for cluster 1459 with 120 probes
2026-06-08 22:24:24,883 - cnv_pipe.batch.run_model.cluster1459 - INFO - Child process finished cluster 1459. Wrote cluster_1459_samples.csv and cluster_1459_params.csv
2026-06-08 22:24:24,885 - cnv_pipe.batch.run_model - INFO - Cluster 1459 finished in 37.52 seconds. Status: SUCCESS