File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/65/ec759b8f3a582378ea98feee6e39cb/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-k2mrhbig because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:56,978 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:57,814 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:57,987 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:58,992 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:59,062 - cnv_pipe.batch.run_model - INFO - Processing cluster 1538 with 195 probes
2026-06-08 22:23:59,525 - cnv_pipe.batch.run_model.cluster1538 - INFO - Child process started for cluster 1538 with 195 probes
2026-06-08 22:24:57,738 - cnv_pipe.batch.run_model.cluster1538 - INFO - Child process finished cluster 1538. Wrote cluster_1538_samples.csv and cluster_1538_params.csv
2026-06-08 22:24:57,739 - cnv_pipe.batch.run_model - INFO - Cluster 1538 finished in 58.68 seconds. Status: SUCCESS