[2026-06-08T22:17:23.942323Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T22:17:23.943439Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T22:17:23.943469Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T22:17:23.943475Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T22:17:23.943479Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXxiliiw'
[2026-06-08T22:17:23.943484Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T22:17:23.943489Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T22:17:23.943492Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T22:17:23.943496Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] [RunParameters] memMb: 3096076
[2026-06-08T22:17:23.943500Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T22:17:23.943503Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T22:17:23.943507Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T22:17:23.943510Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T22:17:23.943514Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T22:17:23.944534Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T22:17:23.944649Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T22:17:23.950457Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T22:17:23.951309Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T22:17:23.951774Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T22:17:23.952019Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T22:17:23.952209Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.952682Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.952776Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.952848Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.952965Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.953073Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.953358Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.953855Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.954045Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.954255Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.956785Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.957521Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T22:17:23.957716Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.957808Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.957943Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958026Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958142Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958212Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958338Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958401Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958528Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958664Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958784Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.958994Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.959392Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.959455Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.959640Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.959705Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.959812Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.959879Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.959988Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.960083Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.960197Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.960259Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.960565Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.961271Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.961489Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.961571Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.961699Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.961774Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.961898Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.961995Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962263Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962626Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962740Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962803Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962918Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.962983Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963159Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963229Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963338Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963404Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963515Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963578Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.963900Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.964299Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.964464Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.964529Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.964636Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.964702Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.964813Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.964876Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.964988Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.965051Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.965158Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.965223Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.965365Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.965510Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.966269Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.966365Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.966490Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.966558Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.966671Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.966738Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.968282Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.968892Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969039Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969111Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969227Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969291Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969404Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969466Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969579Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969637Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969745Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.969814Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.970158Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.970792Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.970905Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.970968Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.971260Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.971337Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.971447Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.971511Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.971624Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.971689Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.987766Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.987858Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.987927Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.988154Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.988223Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.988380Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.988448Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.988576Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.988644Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:17:23.988697Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T22:17:23.996667Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.997543Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.998033Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.999009Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:23.999965Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.001241Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.003394Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.004800Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-06-08T22:17:24.005465Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.008433Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.009124Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-08T22:17:24.013114Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-08T22:17:24.016815Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-06-08T22:17:24.020952Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T22:17:24.023738Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-08T22:17:24.025569Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-06-08T22:17:24.127227Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.128586Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.132667Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-08T22:17:24.745107Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.746335Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:24.750385Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-08T22:17:25.062246Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.063327Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.067205Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-08T22:17:25.318956Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-06-08T22:17:25.329014Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.329130Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.329167Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.330219Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.330855Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.331573Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.338835Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-08T22:17:25.339523Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-08T22:17:25.340620Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-06-08T22:17:25.396526Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.397627Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.401121Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-08T22:17:25.462446Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.462537Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.463548Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.464195Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.469697Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-08T22:17:25.470707Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-06-08T22:17:25.497399Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.499314Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.500385Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.503216Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.505449Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-06-08T22:17:25.507079Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-08T22:17:25.568146Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.569200Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.573300Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-06-08T22:17:25.634316Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.635394Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.639055Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-08T22:17:25.750323Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.751382Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.754882Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-08T22:17:25.816080Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.817188Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.821100Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T22:17:25.882231Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.883310Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:25.886907Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-06-08T22:17:26.198969Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.200043Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.203923Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-08T22:17:26.265807Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.266844Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.270424Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-06-08T22:17:26.531971Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.532091Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.532996Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.533639Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.537194Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-06-08T22:17:26.538104Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-08T22:17:26.599874Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.600926Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.604878Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-08T22:17:26.765963Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.766962Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:26.770647Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-06-08T22:17:27.182833Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.182963Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.183913Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.184797Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.188682Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-08T22:17:27.189931Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-08T22:17:27.250162Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.251184Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.254444Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-08T22:17:27.267497Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.268456Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.271909Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-08T22:17:27.300906Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.301899Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.305664Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-06-08T22:17:27.311415Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.312285Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.315722Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-08T22:17:27.577320Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.578348Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.581439Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-06-08T22:17:27.644481Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.645446Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.648723Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-08T22:17:27.710006Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.710971Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.714010Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-08T22:17:27.775491Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.776433Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.779691Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-08T22:17:27.840961Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.841919Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.845109Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-06-08T22:17:27.906667Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.907635Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.910965Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-06-08T22:17:27.972137Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.973045Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:27.976590Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-06-08T22:17:28.037517Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.038543Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.041968Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-08T22:17:28.104279Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.104375Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.105207Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.105509Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.109501Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-06-08T22:17:28.110015Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-08T22:17:28.123801Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.124618Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.127529Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-08T22:17:28.141188Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.141973Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.144767Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-08T22:17:28.174379Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.175206Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.178248Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-08T22:17:28.239472Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.240346Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.243920Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-06-08T22:17:28.405314Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.406231Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.409657Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-08T22:17:28.439032Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.439820Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.443210Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-08T22:17:28.554558Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.555405Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.558618Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-08T22:17:28.619788Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.620638Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.623979Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-06-08T22:17:28.685101Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.685977Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.689433Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-08T22:17:28.951480Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.952222Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:28.955287Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-08T22:17:29.016749Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.017605Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.021102Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-08T22:17:29.082009Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.082845Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.085766Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-08T22:17:29.116521Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.117344Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.121110Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-08T22:17:29.125571Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.126321Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.129442Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-06-08T22:17:29.240947Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.241756Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.245147Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-08T22:17:29.307596Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.308468Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.311856Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-06-08T22:17:29.374198Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.375048Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.378215Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-06-08T22:17:29.391480Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.392218Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.395522Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-08T22:17:29.707461Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.708271Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.711777Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-08T22:17:29.716559Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.717206Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.720416Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-08T22:17:29.749204Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.749288Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.749991Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.750265Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.753946Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-08T22:17:29.754779Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-06-08T22:17:29.759946Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.760583Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.763315Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-08T22:17:29.792918Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.793010Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.793613Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.794421Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.798048Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-08T22:17:29.799187Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-08T22:17:29.803008Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.803599Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:29.807053Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-08T22:17:30.068642Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.069384Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.073088Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-08T22:17:30.133856Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.134603Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.137923Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-06-08T22:17:30.299320Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.299457Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.300096Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.300839Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.304452Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-08T22:17:30.305777Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-08T22:17:30.366009Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.366704Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:30.370096Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-06-08T22:17:31.083055Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.083740Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.087213Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-06-08T22:17:31.149235Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.149876Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.153039Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-06-08T22:17:31.214343Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.214443Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.214999Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.215690Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.218560Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-06-08T22:17:31.219808Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-08T22:17:31.282650Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.282739Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.283266Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.283879Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.288175Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-08T22:17:31.288920Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-08T22:17:31.316855Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.317450Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.320155Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.320849Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.321587Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-08T22:17:31.324438Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-06-08T22:17:31.385724Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.385821Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.386306Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.386610Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.389454Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-08T22:17:31.390184Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-08T22:17:31.451684Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.451774Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.452239Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.453894Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.455613Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-08T22:17:31.456788Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-06-08T22:17:31.486520Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.488066Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.602300Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.602770Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.605499Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-08T22:17:31.634991Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.749109Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.749197Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.749610Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.750233Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.752887Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-08T22:17:31.754399Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-06-08T22:17:31.814389Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.814476Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.830348Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.830784Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:17:31.833383Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-08T22:17:31.895152Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.159568Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.159654Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.160026Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.160617Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.163643Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-08T22:17:32.164856Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-08T22:17:32.226455Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.226528Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.226763Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.226880Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.227558Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.228094Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.231580Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T22:17:32.231966Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T22:17:32.234134Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T22:17:32.261487Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.261563Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.261751Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.262440Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.264381Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.265031Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T22:17:32.267363Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T22:17:32.296452Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.296528Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.296698Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:17:32.299327Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T22:17:32.328480Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:17:34.546937Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T22:17:42.832449Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T22:17:42.832449Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] 
[2026-06-08T22:17:42.832449Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T22:17:42.832509Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] 
[2026-06-08T22:17:42.832516Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T22:17:42.832524Z] [nf-b3873487e18bc3ef5e4eec155bc4ed80-36c6e-lbw79] [640_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec