File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/8915fc9efd06ba578f1725d8f9d6f6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-e_xwwbzv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:45,754 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:46,547 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:46,720 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:47,807 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:47,875 - cnv_pipe.batch.run_model - INFO - Processing cluster 988 with 172 probes
2026-06-08 22:22:48,251 - cnv_pipe.batch.run_model.cluster988 - INFO - Child process started for cluster 988 with 172 probes
2026-06-08 22:23:40,028 - cnv_pipe.batch.run_model.cluster988 - INFO - Child process finished cluster 988. Wrote cluster_988_samples.csv and cluster_988_params.csv
2026-06-08 22:23:40,029 - cnv_pipe.batch.run_model - INFO - Cluster 988 finished in 52.15 seconds. Status: SUCCESS