File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/24d53923a2f0e67eb3e0cb51fd72cb/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r10ss8b0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:41,257 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:42,048 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:42,220 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:43,431 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:43,499 - cnv_pipe.batch.run_model - INFO - Processing cluster 1420 with 194 probes
2026-06-08 22:23:43,873 - cnv_pipe.batch.run_model.cluster1420 - INFO - Child process started for cluster 1420 with 194 probes
2026-06-08 22:24:43,460 - cnv_pipe.batch.run_model.cluster1420 - INFO - Child process finished cluster 1420. Wrote cluster_1420_samples.csv and cluster_1420_params.csv
2026-06-08 22:24:43,464 - cnv_pipe.batch.run_model - INFO - Cluster 1420 finished in 59.96 seconds. Status: SUCCESS