File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0e/f1ec7657d87d36b9d1bfa1277348e4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-9484csn3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:19:29,300 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:19:30,270 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:19:30,470 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:19:31,592 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:19:31,790 - cnv_pipe.batch.run_model - INFO - Processing cluster 125 with 162 probes
2026-06-08 22:19:32,210 - cnv_pipe.batch.run_model.cluster125 - INFO - Child process started for cluster 125 with 162 probes
2026-06-08 22:20:24,554 - cnv_pipe.batch.run_model.cluster125 - INFO - Child process finished cluster 125. Wrote cluster_125_samples.csv and cluster_125_params.csv
2026-06-08 22:20:24,556 - cnv_pipe.batch.run_model - INFO - Cluster 125 finished in 52.77 seconds. Status: SUCCESS