File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/73/8106f935538d2147fdaca9024af14c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-aleyjle9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:54,484 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:55,329 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:55,505 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:56,558 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:56,743 - cnv_pipe.batch.run_model - INFO - Processing cluster 1084 with 164 probes
2026-06-08 22:22:57,129 - cnv_pipe.batch.run_model.cluster1084 - INFO - Child process started for cluster 1084 with 164 probes
2026-06-08 22:23:46,950 - cnv_pipe.batch.run_model.cluster1084 - INFO - Child process finished cluster 1084. Wrote cluster_1084_samples.csv and cluster_1084_params.csv
2026-06-08 22:23:46,952 - cnv_pipe.batch.run_model - INFO - Cluster 1084 finished in 50.21 seconds. Status: SUCCESS