File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5c/8bcebbb527c86c89b55aec1a1fd016/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5i67cpx5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:21:59,140 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:21:59,994 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:00,169 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:01,156 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:01,230 - cnv_pipe.batch.run_model - INFO - Processing cluster 1026 with 193 probes
2026-06-08 22:22:01,695 - cnv_pipe.batch.run_model.cluster1026 - INFO - Child process started for cluster 1026 with 193 probes
2026-06-08 22:23:00,890 - cnv_pipe.batch.run_model.cluster1026 - INFO - Child process finished cluster 1026. Wrote cluster_1026_samples.csv and cluster_1026_params.csv
2026-06-08 22:23:00,892 - cnv_pipe.batch.run_model - INFO - Cluster 1026 finished in 59.66 seconds. Status: SUCCESS