File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5b/18668e52380929985d819ca0dbddf6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-niiv49iq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:47,393 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:48,187 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:48,355 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:49,301 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:49,471 - cnv_pipe.batch.run_model - INFO - Processing cluster 1104 with 96 probes
2026-06-08 22:22:49,851 - cnv_pipe.batch.run_model.cluster1104 - INFO - Child process started for cluster 1104 with 96 probes
2026-06-08 22:23:20,534 - cnv_pipe.batch.run_model.cluster1104 - INFO - Child process finished cluster 1104. Wrote cluster_1104_samples.csv and cluster_1104_params.csv
2026-06-08 22:23:20,534 - cnv_pipe.batch.run_model - INFO - Cluster 1104 finished in 31.06 seconds. Status: SUCCESS