File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/61396d506bf41bc6c773e44b413e55/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-l2m191a2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:28,510 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:29,333 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:29,500 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:30,512 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:30,578 - cnv_pipe.batch.run_model - INFO - Processing cluster 1135 with 181 probes
2026-06-08 22:22:30,959 - cnv_pipe.batch.run_model.cluster1135 - INFO - Child process started for cluster 1135 with 181 probes
2026-06-08 22:23:27,245 - cnv_pipe.batch.run_model.cluster1135 - INFO - Child process finished cluster 1135. Wrote cluster_1135_samples.csv and cluster_1135_params.csv
2026-06-08 22:23:27,246 - cnv_pipe.batch.run_model - INFO - Cluster 1135 finished in 56.67 seconds. Status: SUCCESS