File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fa/86547f5295ecc595af4764491cca6d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4b0q1twv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:26,320 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:27,167 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:27,337 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:28,294 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:28,479 - cnv_pipe.batch.run_model - INFO - Processing cluster 1902 with 159 probes
2026-06-08 22:24:28,859 - cnv_pipe.batch.run_model.cluster1902 - INFO - Child process started for cluster 1902 with 159 probes
2026-06-08 22:25:16,898 - cnv_pipe.batch.run_model.cluster1902 - INFO - Child process finished cluster 1902. Wrote cluster_1902_samples.csv and cluster_1902_params.csv
2026-06-08 22:25:16,899 - cnv_pipe.batch.run_model - INFO - Cluster 1902 finished in 48.42 seconds. Status: SUCCESS