File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/51/04d4b88909b561622a4c99e7c406d0/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6slos6k_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:33,295 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:34,146 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:34,325 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:35,501 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:35,688 - cnv_pipe.batch.run_model - INFO - Processing cluster 1064 with 165 probes
2026-06-08 22:22:36,058 - cnv_pipe.batch.run_model.cluster1064 - INFO - Child process started for cluster 1064 with 165 probes
2026-06-08 22:23:28,992 - cnv_pipe.batch.run_model.cluster1064 - INFO - Child process finished cluster 1064. Wrote cluster_1064_samples.csv and cluster_1064_params.csv
2026-06-08 22:23:28,993 - cnv_pipe.batch.run_model - INFO - Cluster 1064 finished in 53.31 seconds. Status: SUCCESS