File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/dd8d90674b5b289c4c06d4648af9f9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xi8afoe8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:37,157 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:38,036 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:38,210 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:39,172 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:39,256 - cnv_pipe.batch.run_model - INFO - Processing cluster 789 with 168 probes
2026-06-08 22:22:39,706 - cnv_pipe.batch.run_model.cluster789 - INFO - Child process started for cluster 789 with 168 probes
2026-06-08 22:23:31,676 - cnv_pipe.batch.run_model.cluster789 - INFO - Child process finished cluster 789. Wrote cluster_789_samples.csv and cluster_789_params.csv
2026-06-08 22:23:31,677 - cnv_pipe.batch.run_model - INFO - Cluster 789 finished in 52.42 seconds. Status: SUCCESS