File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/15/4ced44c4d5e197982dfdc29e1899a4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-itshkw0q because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:20,560 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:21,416 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:21,595 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:22,602 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:22,762 - cnv_pipe.batch.run_model - INFO - Processing cluster 1511 with 184 probes
2026-06-08 22:23:23,143 - cnv_pipe.batch.run_model.cluster1511 - INFO - Child process started for cluster 1511 with 184 probes
2026-06-08 22:24:21,967 - cnv_pipe.batch.run_model.cluster1511 - INFO - Child process finished cluster 1511. Wrote cluster_1511_samples.csv and cluster_1511_params.csv
2026-06-08 22:24:21,969 - cnv_pipe.batch.run_model - INFO - Cluster 1511 finished in 59.21 seconds. Status: SUCCESS