mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-761vb5_5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:21:08,810 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:21:09,717 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:21:09,896 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:21:10,934 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:21:11,178 - cnv_pipe.batch.run_model - INFO - Processing cluster 541 with 177 probes
2026-06-08 22:21:11,551 - cnv_pipe.batch.run_model.cluster541 - INFO - Child process started for cluster 541 with 177 probes
2026-06-08 22:22:06,918 - cnv_pipe.batch.run_model.cluster541 - INFO - Child process finished cluster 541. Wrote cluster_541_samples.csv and cluster_541_params.csv
2026-06-08 22:22:06,919 - cnv_pipe.batch.run_model - INFO - Cluster 541 finished in 55.74 seconds. Status: SUCCESS