File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/aa98adc4d6a24ab1d540dd8acde3d3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-six6rcpn because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:08,811 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:09,672 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:09,851 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:10,865 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:11,071 - cnv_pipe.batch.run_model - INFO - Processing cluster 1443 with 188 probes
2026-06-08 22:23:11,452 - cnv_pipe.batch.run_model.cluster1443 - INFO - Child process started for cluster 1443 with 188 probes
2026-06-08 22:24:09,726 - cnv_pipe.batch.run_model.cluster1443 - INFO - Child process finished cluster 1443. Wrote cluster_1443_samples.csv and cluster_1443_params.csv
2026-06-08 22:24:09,727 - cnv_pipe.batch.run_model - INFO - Cluster 1443 finished in 58.66 seconds. Status: SUCCESS