File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/22/0288e498a21c7cdc5e9c6a185ff070/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-x5euyg6g because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:48,744 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:49,604 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:49,778 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:50,739 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:50,903 - cnv_pipe.batch.run_model - INFO - Processing cluster 1217 with 187 probes
2026-06-08 22:23:51,279 - cnv_pipe.batch.run_model.cluster1217 - INFO - Child process started for cluster 1217 with 187 probes
2026-06-08 22:24:49,248 - cnv_pipe.batch.run_model.cluster1217 - INFO - Child process finished cluster 1217. Wrote cluster_1217_samples.csv and cluster_1217_params.csv
2026-06-08 22:24:49,250 - cnv_pipe.batch.run_model - INFO - Cluster 1217 finished in 58.35 seconds. Status: SUCCESS