mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-flfpbjnf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:21:04,090 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:21:04,933 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:21:05,171 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:21:06,314 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:21:06,521 - cnv_pipe.batch.run_model - INFO - Processing cluster 564 with 167 probes
2026-06-08 22:21:06,895 - cnv_pipe.batch.run_model.cluster564 - INFO - Child process started for cluster 564 with 167 probes
2026-06-08 22:21:59,111 - cnv_pipe.batch.run_model.cluster564 - INFO - Child process finished cluster 564. Wrote cluster_564_samples.csv and cluster_564_params.csv
2026-06-08 22:21:59,112 - cnv_pipe.batch.run_model - INFO - Cluster 564 finished in 52.59 seconds. Status: SUCCESS