mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ne5waci6 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:20:40,792 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:20:41,625 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:20:41,802 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:20:42,900 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:20:42,972 - cnv_pipe.batch.run_model - INFO - Processing cluster 561 with 190 probes
2026-06-08 22:20:43,344 - cnv_pipe.batch.run_model.cluster561 - INFO - Child process started for cluster 561 with 190 probes
2026-06-08 22:21:40,373 - cnv_pipe.batch.run_model.cluster561 - INFO - Child process finished cluster 561. Wrote cluster_561_samples.csv and cluster_561_params.csv
2026-06-08 22:21:40,374 - cnv_pipe.batch.run_model - INFO - Cluster 561 finished in 57.40 seconds. Status: SUCCESS