File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fe/c450d25a9139ddb4ab5426a18c148c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hymbf62s because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:21:34,397 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:21:35,270 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:21:35,441 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:21:36,451 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:21:36,611 - cnv_pipe.batch.run_model - INFO - Processing cluster 876 with 191 probes
2026-06-08 22:21:36,982 - cnv_pipe.batch.run_model.cluster876 - INFO - Child process started for cluster 876 with 191 probes
2026-06-08 22:22:34,729 - cnv_pipe.batch.run_model.cluster876 - INFO - Child process finished cluster 876. Wrote cluster_876_samples.csv and cluster_876_params.csv
2026-06-08 22:22:34,730 - cnv_pipe.batch.run_model - INFO - Cluster 876 finished in 58.12 seconds. Status: SUCCESS