File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/82/24ac0f57f5bf634c19d7858643d387/.command.err
Size
1.2 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-v_yvmg1a because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:19:20,000 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:19:20,910 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:19:21,088 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:19:22,245 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:19:22,313 - cnv_pipe.batch.run_model - INFO - Processing cluster 71 with 169 probes
2026-06-08 22:19:22,706 - cnv_pipe.batch.run_model.cluster71 - INFO - Child process started for cluster 71 with 169 probes
2026-06-08 22:20:16,037 - cnv_pipe.batch.run_model.cluster71 - INFO - Child process finished cluster 71. Wrote cluster_71_samples.csv and cluster_71_params.csv
2026-06-08 22:20:16,038 - cnv_pipe.batch.run_model - INFO - Cluster 71 finished in 53.72 seconds. Status: SUCCESS