mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-39brgp0k because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:43,403 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:44,191 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:44,360 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:45,424 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:45,617 - cnv_pipe.batch.run_model - INFO - Processing cluster 722 with 189 probes
2026-06-08 22:22:46,000 - cnv_pipe.batch.run_model.cluster722 - INFO - Child process started for cluster 722 with 189 probes
2026-06-08 22:23:41,495 - cnv_pipe.batch.run_model.cluster722 - INFO - Child process finished cluster 722. Wrote cluster_722_samples.csv and cluster_722_params.csv
2026-06-08 22:23:41,497 - cnv_pipe.batch.run_model - INFO - Cluster 722 finished in 55.88 seconds. Status: SUCCESS