File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c1/a09415d6b1fc37046335b90b5b8dd1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5x_xc6sr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:50,973 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:51,770 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:51,936 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:52,926 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:52,995 - cnv_pipe.batch.run_model - INFO - Processing cluster 1694 with 180 probes
2026-06-08 22:23:53,382 - cnv_pipe.batch.run_model.cluster1694 - INFO - Child process started for cluster 1694 with 180 probes
2026-06-08 22:24:45,211 - cnv_pipe.batch.run_model.cluster1694 - INFO - Child process finished cluster 1694. Wrote cluster_1694_samples.csv and cluster_1694_params.csv
2026-06-08 22:24:45,213 - cnv_pipe.batch.run_model - INFO - Cluster 1694 finished in 52.22 seconds. Status: SUCCESS