File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/7c83ba6ad0fe49010251cc0cc6607e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-91q3v6p7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:41,338 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:42,187 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:42,356 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:43,292 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:43,501 - cnv_pipe.batch.run_model - INFO - Processing cluster 1606 with 186 probes
2026-06-08 22:23:43,886 - cnv_pipe.batch.run_model.cluster1606 - INFO - Child process started for cluster 1606 with 186 probes
2026-06-08 22:24:38,114 - cnv_pipe.batch.run_model.cluster1606 - INFO - Child process finished cluster 1606. Wrote cluster_1606_samples.csv and cluster_1606_params.csv
2026-06-08 22:24:38,115 - cnv_pipe.batch.run_model - INFO - Cluster 1606 finished in 54.61 seconds. Status: SUCCESS