Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/86e4537d8e054fb39915c03a6737ee/HCC1395_BL.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/c4e98831a30a7c0afc2fc668203ebf/HCC1395_BL.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/2eaa6e299df92fc7f7611cf65d4168/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/30/e8db51e92c46ec4abb0bfabc50a675/HCC1395_BL.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/93/26edd0052e2209a61942df0dfbc1e2/HCC1395_BL.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b8/0bc6762a3bbedbefac84c02690c106/HCC1395_BL.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a5/eb2b6e36ff8827cc3f4421e9f0ecf9/HCC1395_BL.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d2/3b023b0f5029874b4239b348ae19a7/HCC1395_BL.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/987398c80e313b5d7148c77e9fbf17/HCC1395_BL.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/2eaa6e299df92fc7f7611cf65d4168/.command.run
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory