File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/97257503812f2e8050ab23e02e4ed1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-0hbop9xa because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:20,724 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:21,564 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:21,741 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:22,847 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:22,926 - cnv_pipe.batch.run_model - INFO - Processing cluster 1385 with 190 probes
2026-06-08 22:23:23,328 - cnv_pipe.batch.run_model.cluster1385 - INFO - Child process started for cluster 1385 with 190 probes
2026-06-08 22:24:19,217 - cnv_pipe.batch.run_model.cluster1385 - INFO - Child process finished cluster 1385. Wrote cluster_1385_samples.csv and cluster_1385_params.csv
2026-06-08 22:24:19,219 - cnv_pipe.batch.run_model - INFO - Cluster 1385 finished in 56.29 seconds. Status: SUCCESS