File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fd/9fb79a8bb15d0fc4da4c3eee780daf/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-h2ydf_oq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:20:28,752 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:20:29,628 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:20:29,805 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:20:30,899 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:20:30,973 - cnv_pipe.batch.run_model - INFO - Processing cluster 484 with 198 probes
2026-06-08 22:20:31,348 - cnv_pipe.batch.run_model.cluster484 - INFO - Child process started for cluster 484 with 198 probes
2026-06-08 22:21:32,872 - cnv_pipe.batch.run_model.cluster484 - INFO - Child process finished cluster 484. Wrote cluster_484_samples.csv and cluster_484_params.csv
2026-06-08 22:21:32,873 - cnv_pipe.batch.run_model - INFO - Cluster 484 finished in 61.90 seconds. Status: SUCCESS