File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ee/dd11dcf042d0719ba05288fae3022a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7jiodr5o because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:36,760 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:37,571 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:37,745 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:38,786 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:38,948 - cnv_pipe.batch.run_model - INFO - Processing cluster 1517 with 164 probes
2026-06-08 22:23:39,330 - cnv_pipe.batch.run_model.cluster1517 - INFO - Child process started for cluster 1517 with 164 probes
2026-06-08 22:24:30,329 - cnv_pipe.batch.run_model.cluster1517 - INFO - Child process finished cluster 1517. Wrote cluster_1517_samples.csv and cluster_1517_params.csv
2026-06-08 22:24:30,331 - cnv_pipe.batch.run_model - INFO - Cluster 1517 finished in 51.38 seconds. Status: SUCCESS