File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c0/f3d5e88bd96e69b70087da38cc43d6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-y8xbju8h because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:21:25,018 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:21:25,893 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:21:26,075 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:21:27,181 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:21:27,356 - cnv_pipe.batch.run_model - INFO - Processing cluster 728 with 192 probes
2026-06-08 22:21:27,730 - cnv_pipe.batch.run_model.cluster728 - INFO - Child process started for cluster 728 with 192 probes
2026-06-08 22:22:28,438 - cnv_pipe.batch.run_model.cluster728 - INFO - Child process finished cluster 728. Wrote cluster_728_samples.csv and cluster_728_params.csv
2026-06-08 22:22:28,439 - cnv_pipe.batch.run_model - INFO - Cluster 728 finished in 61.08 seconds. Status: SUCCESS